Open Source Software

Description:

7-Zip is a free and open-source file archiver, a utility used to place groups of files within compressed containers known as "archives".

Tag(s):

• Zip
• Archive

Description:

Accumulo is a sorted, distributed key/value store that provides robust, scalable data storage and retrieval.

Tag(s):

• Application

Description:

Activiti is a light-weight workflow and Business Process Management (BPM) Platform targeted at business people, developers and system admins.

Tag(s):

• BPM

Description:

A platform for data scientists and other technical professions.

Tag(s):

• Sharing knowledge

Description:

Airflow is a platform to programmatically author, schedule and monitor workflows.

Tag(s):

• Data integration

Description:

Anaconda is a distribution of the Python and R programming languages for scientific computing.

Tag(s):

• Python
• R
• Data Science

Description:

A framework for mobile and desktop applications.

Tag(s):

• software framework

Description:

Ansible is an IT automation tool.

Tag(s):

• Application platform

Description:

Cross-platform web server.

Tag(s):

• Web Server

Description:

A set of software tools for genome browsing and annotation.

Tag(s):

• Genome

Description:

Audacity is a free and open-source digital audio editor and recording application software. (mp3, Wave, AIFF, Flac, Ogg...)

Tag(s):

• audio

Description:

Beagle is a software package for phasing genotypes and for imputing ungenotyped markers.

Tag(s):

• Genotypes

Description:

Bokeh is an interactive visualization library that targets modern web browsers for presentation.

Tag(s):

• Visualisation

Description:

Bugzilla is a web-based general-purpose bug tracking system and testing tool originally developed and used by the Mozilla project, and licensed under the Mozilla Public License.

Tag(s):

• Bug Tracking

Description:

calibre is a powerful and easy to use e-book manager.

Tag(s):

• eBook

Description:

Apache Cassandra is a highly-scalable partitioned row store.

Tag(s):

• Data base

Description:

Debezium is an open source distributed platform for change data capture.

Tag(s):

• Incremental management of data

Description:

Demeter is a comprehensive system for processing and analyzing X-ray Absorption Spectroscopy data.

Tag(s):

• X-Ray

Description:

Performs operating-system-level virtualization also known as containerization

Tag(s):

• Container platform
• Development
• Infrastructure

Description:

Content management system (CMS) written in PHP. Drupal provides a back-end framework for web sites.

Tag(s):

• Application platform

Description:

Eclipse is an integrated development environment (IDE) used in computer programming. It contains a base workspace and an extensible plug-in system for customizing the environment.

Tag(s):

• IDE

Description:

Elasticsearch is a distributed, RESTful search and analytics engine capable of solving a growing number of use cases.

Tag(s):

• Website

Description:

Highly customizable web framework and CMS for building social apps

Tag(s):

• Collaboration
• Social

Description:

Edit text documents collaboratively in real-time.

Tag(s):

• Collaboration
• Text editor
• Productivity

Description:

The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing.

Tag(s):

• Tools

Description:

Web browser developed by Mozilla Foundation.

Tag(s):

• Web browser
• Desktop
• Mobile

Description:

FreeCAD is a general-purpose parametric 3D CAD modeler and a building information modeling (BIM) software with finite-element-method (FEM) support.

Tag(s):

• CAD

Description:

GeoNode is a web-based application and platform for developing geospatial information systems (GIS) and for deploying spatial data infrastructures (SDI).

Tag(s):

• GIS

Description:

GeoServer is a mature, standards-based open source geospatial content management system. GeoServer implements Open Geospatial Consortium (OGC) Web services and IPA, such as WMS, WMTS, WFS, WCS etc.

Tag(s):

• Geospatial
• Maps
• Location

Description:

GIMP is a cross-platform image editor available for GNU/Linux, OS X, Windows and more operating systems.

Tag(s):

• Graphics

Description:

Git is a free and open source distributed version control system designed to handle everything from small to very large projects with speed and efficiency.

Tag(s):

• Git
• Source Control

Description:

The GNU Readline library provides a set of functions for use by applications that allow users to edit command lines as they are typed in.

Tag(s):

• Library

Description:

Greenshot is a light-weight screenshot software tool for Windows with the following key features: Quickly create screenshots of a selected region, window or fullscreen; you can even capture complete

Tag(s):

• Screenshot

Description:

HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads against the general human population.

Tag(s):

• Genome

Description:

Inkscape is a free and open-source vector graphics editor.

Tag(s):

• Image
• Vector

Description:

Inselect is an application that automates the cropping of individual images of specimens from whole-drawer scans and similar images.

Tag(s):

• Image

Description:

iPerf is a tool for active measurements of the maximum achievable bandwidth on IP networks.

Tag(s):

• Bandwidth

Description:

iTop stands for IT Operations Portal. It is a complete open source, ITIL, web based service management tool including a fully customizable CMDB, a helpdesk system and a document management tool. iTop

Tag(s):

• ITSM
• CMDB

Description:

Transform your plain text into static websites and blogs.

Tag(s):

• Website

Description:

A video player that provides a set of tools to capture, slow down, study, compare, annotate and measure technical performances.

Tag(s):

• Video

Description:

LAME is a high quality MPEG Audio Layer III (MP3) encoder licensed under the LGPL.

Tag(s):

• Audio

Description:

PHP web framework intended for the development of web applications following the model–view–controller (MVC) architectural pattern.

Tag(s):

• HTTP Server
• PHP

Description:

Laravel Enterprise Starter Kit, is a template project based on the Laravel framework, combining a set of features that can kick start any Web application.

Tag(s):

• HTTP Server
• PHP
• Laravel

Description:

LibreOffice is a powerful office suite – its clean interface and feature-rich tools help you unleash your creativity and enhance your productivity.

Tag(s):

• Office

Description:

The Linux kernel is a Unix-like computer operating system kernel.

Tag(s):

• Operating system kernel

Description:

Mailman is free software for managing electronic mail discussion and e-newsletter lists.

Tag(s):

• Mailing List

Description:

MantisBT is an open source issue tracker that provides a delicate balance between simplicity and power.

Tag(s):

• Bug Tracking

Description:

Wiki package written in PHP, originally for use on Wikipedia.

Tag(s):

• Wiki
• Website

Description:

Metabase is a simple and powerful analytics tool which lets anyone learn and make decisions from their company’s data.

Tag(s):

• Business Intelligence

Description:

MySQL is an open-source relational database management system.

Tag(s):

• Database

Description:

.NET Core is a free and open-source, managed computer software framework that is a cross-platform successor to .NET Framework.

Tag(s):

• Programming Language

Description:

Netscape Portable Runtime (NSPR) provides a platform-neutral API for system level and libc-like functions.

Tag(s):

• API

Description:

Nextcloud is an on-premises content collaboration platform allowing to share files and offering multiple collaboration tools as add-ons.

Tag(s):

• cloud
• collaboration

Description:

Text editor and Notepad replacement that runs in the Windows environment.

Tag(s):

• Desktop
• Productivity
• Text editor

Description:

NumPy is the fundamental package for scientific computing with Python.

Tag(s):

• Python

Description:

NVDA allows blind and vision impaired people to access and interact with the Windows operating system and many third party applications.

Tag(s):

• Accessibility

Description:

OpenProject is the leading free and open source project management software. Established in 2012, OpenProject supports your projects throughout the whole life-cycle

Tag(s):

• Project Management

Description:

OpenSSH is a suite of secure networking utilities based on the Secure Shell (SSH) protocol.

Tag(s):

• SSH

Description:

Perl is a highly capable, feature-rich programming language with over 30 years of development.

Tag(s):

• Programming Language

Description:

PhantomJS is a headless browser used for automating web page interaction.

Tag(s):

• Browser

Description:

A server-side scripting language designed for web development but also used as a general-purpose programming language.

Tag(s):

• Programming language

Description:

A full-featured email creation and transfer class for PHP.

Tag(s):

• Library
• Email

Description:

PHYLIP is a free package of programs for inferring phylogenies.

Tag(s):

• Phylogenetics

Description:

Plot Digitizer is a Java program used to digitize scanned plots of functional data.

Tag(s):

• Plot

Description:

Poppr is an R package designed for analysis of populations with mixed modes of sexual and clonal reproduction.

Tag(s):

• Package
• R

Description:

ProjectLibre is project management software.

Tag(s):

• Project

Description:

PuTTY is a free and open-source terminal emulator, serial console and network file transfer application.

Tag(s):

• SCP
• SSH
• Telnet

Description:

PyDev is a Python IDE for Eclipse, which may be used in Python, Jython and IronPython development.

Tag(s):

• IDE

Description:

PyScripter is an open-source Python Integrated Development Environment (IDE).

Tag(s):

• IDE

Description:

Python is an interpreted, high-level, general-purpose programming language.

Tag(s):

• Programming Language

Description:

A Free and Open Source Geographic Information System (GIS).

Tag(s):

• GIS

Description:

QIIME is an open-source bioinformatics pipeline for performing microbiome analysis from raw DNA sequencing data.

Tag(s):

• DNA

Description:

R is a programming language environment for statistical computing and graphics supported by the R Foundation for Statistical Computing.

Tag(s):

• Programming Language

Description:

Instant messaging team chat.

Tag(s):

• Instant messaging

Description:

RStudio is an integrated development environment (IDE) for R.

Tag(s):

• IDE
• R

Description:

rsync is a utility for efficiently transferring and synchronizing files between a computer and an external hard drive and across networked computers.

Tag(s):

• File Transfer

Description:

Ruby is an interpreted, high-level, general-purpose programming language.

Tag(s):

• Programming Language

Description:

System for Automated Geoscientific Analyses is a geographic information system computer program, used to edit spatial data.

Tag(s):

• GIS

Description:

Samtools is a suite of programs for interacting with high-throughput sequencing data.

Tag(s):

• DNA

Description:

Specify processes the data associated with specimens in biological research collections.

Tag(s):

• Data

Description:

Subtitle Workshop is a free application for creating, editing, and converting text-based subtitle files.

Tag(s):

• Subtitles

Description:

Subversion is an open source version control system.

Tag(s):

• Source Control

Description:

Texmaker is a cross-platform open-source LaTeX editor with an integrated PDF viewer.

Tag(s):

• LaTeX

Description:

The Apache Tomcat® software is an open source implementation of the Java Servlet, JavaServer Pages, Java Expression Language and Java WebSocket technologies.

Tag(s):

• Server

Description:

Ubuntu is a free and open-source Linux distribution based on Debian.

Tag(s):

• Linux

Description:

Cura is an open source 3D printer slicing application.

Tag(s):

• 3D Printing

Description:

Vagrant is an open-source software product for building and maintaining portable virtual software development environments.

Tag(s):

• VM

Description:

Vim is a greatly improved version of the good old UNIX editor Vi.

Tag(s):

• Vi

Description:

VirtualDub is a free and open-source video capture and video processing utility for Microsoft Windows.

Tag(s):

• Video

Description:

VLC media player is a free and open-source portable cross-platform media player software and streaming media server developed by the VideoLAN project.

Tag(s):

• Video

Description:

The CARTO Maps API tiler. It extends Windshaft and exposes a web service with extra functionality.

Tag(s):

• API

Description:

WinMerge is an Open Source differencing and merging tool for Windows. WinMerge can compare both folders and files, presenting differences in a visual text format that is easy to understand and handle.

Tag(s):

• Compare

Description:

WinSCP (Windows Secure Copy) is a free and open-source SFTP, FTP, WebDAV, Amazon S3 and SCP client for Microsoft Windows. Its main function is secure file transfer between a local and a remote compute

Tag(s):

• SCP

Description:

The WiX toolset lets developers create installers for Windows Installer, the Windows installation engine.

Tag(s):

• Install

Description:

A barcode encoding library supporting over 50 symbologies.

Tag(s):

• Barcode
• Library

Description:

zlib is a general-purpose lossless data-compression library for use on virtually any computer hardware and OS.

Tag(s):

• Compression
• Library